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mario
5
modes/microscopy/src/id.js
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5
modes/microscopy/src/id.js
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import packageJson from '../package.json';
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const id = packageJson.name;
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export { id };
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135
modes/microscopy/src/index.tsx
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135
modes/microscopy/src/index.tsx
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import { hotkeys } from '@ohif/core';
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import i18n from 'i18next';
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import { id } from './id';
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import toolbarButtons from './toolbarButtons';
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const ohif = {
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layout: '@ohif/extension-default.layoutTemplateModule.viewerLayout',
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sopClassHandler: '@ohif/extension-default.sopClassHandlerModule.stack',
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hangingProtocols: '@ohif/extension-default.hangingProtocolModule.default',
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leftPanel: '@ohif/extension-default.panelModule.seriesList',
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rightPanel: '@ohif/extension-default.panelModule.measure',
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};
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export const cornerstone = {
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viewport: '@ohif/extension-cornerstone.viewportModule.cornerstone',
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};
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const dicomvideo = {
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sopClassHandler: '@ohif/extension-dicom-video.sopClassHandlerModule.dicom-video',
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viewport: '@ohif/extension-dicom-video.viewportModule.dicom-video',
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};
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const dicompdf = {
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sopClassHandler: '@ohif/extension-dicom-pdf.sopClassHandlerModule.dicom-pdf',
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viewport: '@ohif/extension-dicom-pdf.viewportModule.dicom-pdf',
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};
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const extensionDependencies = {
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// Can derive the versions at least process.env.from npm_package_version
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'@ohif/extension-default': '^3.0.0',
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'@ohif/extension-cornerstone': '^3.0.0',
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'@ohif/extension-cornerstone-dicom-sr': '^3.0.0',
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'@ohif/extension-dicom-pdf': '^3.0.1',
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'@ohif/extension-dicom-video': '^3.0.1',
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'@ohif/extension-dicom-microscopy': '^3.0.0',
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};
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function modeFactory({ modeConfiguration }) {
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return {
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// TODO: We're using this as a route segment
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// We should not be.
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id,
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routeName: 'microscopy',
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displayName: i18n.t('Modes:Microscopy'),
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/**
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* Lifecycle hooks
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*/
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onModeEnter: ({ servicesManager, extensionManager, commandsManager }: withAppTypes) => {
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const { toolbarService } = servicesManager.services;
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toolbarService.addButtons(toolbarButtons);
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toolbarService.createButtonSection('primary', ['MeasurementTools', 'dragPan', 'TagBrowser']);
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},
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onModeExit: ({ servicesManager }: withAppTypes) => {
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const { toolbarService, uiDialogService, uiModalService } = servicesManager.services;
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uiDialogService.dismissAll();
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uiModalService.hide();
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toolbarService.reset();
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},
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validationTags: {
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study: [],
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series: [],
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},
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isValidMode: ({ modalities }) => {
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const modalities_list = modalities.split('\\');
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return {
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valid: modalities_list.includes('SM'),
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description: 'Microscopy mode only supports the SM modality',
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};
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},
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routes: [
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{
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path: 'microscopy',
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/*init: ({ servicesManager, extensionManager }) => {
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//defaultViewerRouteInit
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},*/
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layoutTemplate: ({ location, servicesManager }) => {
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return {
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id: ohif.layout,
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props: {
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leftPanels: [ohif.leftPanel],
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leftPanelClosed: true, // we have problem with rendering thumbnails for microscopy images
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rightPanelClosed: true, // we do not have the save microscopy measurements yet
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rightPanels: ['@ohif/extension-dicom-microscopy.panelModule.measure'],
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viewports: [
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{
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namespace: '@ohif/extension-dicom-microscopy.viewportModule.microscopy-dicom',
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displaySetsToDisplay: [
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// Share the sop class handler with cornerstone version of it
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'@ohif/extension-cornerstone.sopClassHandlerModule.DicomMicroscopySopClassHandler',
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'@ohif/extension-dicom-microscopy.sopClassHandlerModule.DicomMicroscopySRSopClassHandler',
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],
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},
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{
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namespace: dicomvideo.viewport,
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displaySetsToDisplay: [dicomvideo.sopClassHandler],
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},
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{
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namespace: dicompdf.viewport,
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displaySetsToDisplay: [dicompdf.sopClassHandler],
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},
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],
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},
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};
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},
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},
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],
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extensions: extensionDependencies,
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hangingProtocol: 'default',
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sopClassHandlers: [
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'@ohif/extension-cornerstone.sopClassHandlerModule.DicomMicroscopySopClassHandler',
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'@ohif/extension-dicom-microscopy.sopClassHandlerModule.DicomMicroscopySRSopClassHandler',
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dicomvideo.sopClassHandler,
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dicompdf.sopClassHandler,
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],
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hotkeys: [...hotkeys.defaults.hotkeyBindings],
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...modeConfiguration,
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};
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}
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const mode = {
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id,
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modeFactory,
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extensionDependencies,
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};
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export default mode;
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164
modes/microscopy/src/toolbarButtons.js
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164
modes/microscopy/src/toolbarButtons.js
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import { ToolbarService } from '@ohif/core';
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const toolbarButtons = [
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{
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id: 'MeasurementTools',
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uiType: 'ohif.splitButton',
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props: {
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groupId: 'MeasurementTools',
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// group evaluate to determine which item should move to the top
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evaluate: 'evaluate.group.promoteToPrimary',
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primary: ToolbarService.createButton({
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id: 'line',
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icon: 'tool-length',
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label: 'Line',
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tooltip: 'Line',
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commands: [
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{
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commandName: 'setToolActive',
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commandOptions: { toolName: 'line' },
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context: 'MICROSCOPY',
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},
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],
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evaluate: 'evaluate.microscopyTool',
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}),
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secondary: {
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icon: 'chevron-down',
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tooltip: 'More Measure Tools',
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},
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items: [
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ToolbarService.createButton({
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id: 'line',
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icon: 'tool-length',
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label: 'Line',
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tooltip: 'Line',
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commands: [
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{
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commandName: 'setToolActive',
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commandOptions: { toolName: 'line' },
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context: 'MICROSCOPY',
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},
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],
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evaluate: 'evaluate.microscopyTool',
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}),
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ToolbarService.createButton({
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id: 'point',
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icon: 'tool-point',
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label: 'Point',
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tooltip: 'Point Tool',
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commands: [
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{
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commandName: 'setToolActive',
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commandOptions: { toolName: 'point' },
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context: 'MICROSCOPY',
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},
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],
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evaluate: 'evaluate.microscopyTool',
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}),
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// Point Tool was previously defined
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ToolbarService.createButton({
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id: 'polygon',
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icon: 'tool-polygon',
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label: 'Polygon',
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tooltip: 'Polygon Tool',
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commands: [
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{
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commandName: 'setToolActive',
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commandOptions: { toolName: 'polygon' },
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context: 'MICROSCOPY',
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},
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],
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evaluate: 'evaluate.microscopyTool',
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}),
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ToolbarService.createButton({
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id: 'circle',
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icon: 'tool-circle',
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label: 'Circle',
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tooltip: 'Circle Tool',
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commands: [
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{
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commandName: 'setToolActive',
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commandOptions: { toolName: 'circle' },
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context: 'MICROSCOPY',
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},
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],
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evaluate: 'evaluate.microscopyTool',
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}),
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ToolbarService.createButton({
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id: 'box',
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icon: 'tool-rectangle',
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label: 'Box',
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tooltip: 'Box Tool',
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commands: [
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{
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commandName: 'setToolActive',
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commandOptions: { toolName: 'box' },
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context: 'MICROSCOPY',
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},
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],
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evaluate: 'evaluate.microscopyTool',
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}),
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ToolbarService.createButton({
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id: 'freehandpolygon',
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icon: 'tool-freehand-polygon',
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label: 'Freehand Polygon',
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tooltip: 'Freehand Polygon Tool',
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commands: [
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{
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commandName: 'setToolActive',
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commandOptions: { toolName: 'freehandpolygon' },
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context: 'MICROSCOPY',
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},
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],
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evaluate: 'evaluate.microscopyTool',
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}),
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ToolbarService.createButton({
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id: 'freehandline',
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icon: 'tool-freehand-line',
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label: 'Freehand Line',
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tooltip: 'Freehand Line Tool',
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commands: [
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{
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commandName: 'setToolActive',
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commandOptions: { toolName: 'freehandline' },
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context: 'MICROSCOPY',
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},
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],
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evaluate: 'evaluate.microscopyTool',
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}),
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],
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},
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},
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{
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id: 'dragPan',
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uiType: 'ohif.radioGroup',
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props: {
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icon: 'tool-move',
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label: 'Pan',
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commands: [
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{
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commandName: 'setToolActive',
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commandOptions: { toolName: 'dragPan' },
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context: 'MICROSCOPY',
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},
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],
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evaluate: 'evaluate.microscopyTool',
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},
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},
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{
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id: 'TagBrowser',
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uiType: 'ohif.radioGroup',
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props: {
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icon: 'dicom-tag-browser',
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label: 'Dicom Tag Browser',
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commands: [
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{
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commandName: 'openDICOMTagViewer',
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},
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],
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evaluate: 'evaluate.action',
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},
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},
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];
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export default toolbarButtons;
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