refactor: remove vendored binaries and raw assets from repo

README.md

@@ -46,15 +46,8 @@ scripts/setup-microdicom.sh --source-dir /path/to/microdicom
 Or download your hosted release assets directly:
 
 ```bash
-scripts/setup-dcmtk.sh --archive-url https://<gitea-host>/<owner>/<repo>/releases/download/<tag>/dcmtk-bin.tar.gz
+scripts/setup-dcmtk.sh --archive-url https://github.com/<owner>/<repo>/releases/download/<tag>/dcmtk-bin.tar.gz
-scripts/setup-microdicom.sh --archive-url https://<gitea-host>/<owner>/<repo>/releases/download/<tag>/microdicom.zip
+scripts/setup-microdicom.sh --archive-url https://github.com/<owner>/<repo>/releases/download/<tag>/microdicom.zip
-```
-
-Example:
-
-```bash
-scripts/setup-dcmtk.sh --archive-url https://devone.aplikasi.web.id/gitea/farrel/dicom-iso/releases/download/1/dcmtk-bin.tar.gz
-scripts/setup-microdicom.sh --archive-url https://devone.aplikasi.web.id/gitea/farrel/dicom-iso/releases/download/1/microdicom.zip
 ```
 
 Create a local config file from the template:

deploy/end-to-end-deploy-setup.md

@@ -1,265 +0,0 @@
-## Minimal App Setup
-
-Clone this repository
-
-```bash
-scripts/setup-dcmtk.sh --archive-url https://devone.aplikasi.web.id/gitea/farrel/dicom-iso/releases/download/1/dcmtk-bin.tar.gz
-scripts/setup-microdicom.sh --archive-url https://devone.aplikasi.web.id/gitea/farrel/dicom-iso/releases/download/1/microdicom.zip
-```
-
-Create a local config file from the template:
-
-```bash
-cp config.example.yaml config.yaml
-```
-
-Then adjust the paths, hosts, ports, and tokens for your environment.
-For local staging via the setup scripts, point config at `.local/dcmtk-bin/` and `.local/microdicom/`.
-
-## Build
-A normal Go build is enough in a friendly environment:
-
-```bash
-go build -o mkiso-server .
-```
-
-## Run
-You can run the service directly:
-
-```bash
-./mkiso-server
-```
-
-Or pass a config path explicitly:
-
-```bash
-./mkiso-server /path/to/config.yaml
-```
-
-By default, the app looks for `./config.yaml`.
-
-## Health check
-After startup, check:
-
-```bash
-curl http://127.0.0.1:8080/api/health
-```
-
-## Config
-Use `config.example.yaml` as the starting point.
-Keep real `config.yaml` local and untracked.
-
-## Scp to VPS
-
-```bash
-scp ./mkiso-server <user-ssh>@<server-ip>:/opt/dicom-iso/
-```
-
-## Minimal Setup VPS + DCM4CHE
- 
- ```bash
-   # SSH to server
-   ssh <user-ssh>@<server-ip>
-
-   # Create user 'one'
-   sudo useradd -m -s /bin/bash one
-   echo 'one:sasone102938' | sudo chpasswd
-   sudo usermod -aG sudo one
-
-   # Install base packages
-   sudo apt update
-   sudo apt install -y zsh git curl wget vim ca-certificates gnupg lsb-release util-linux docker.io docker-compose-plugin
- fail2ban
-
-   # Enable docker and add user to docker group
-   sudo systemctl enable --now docker
-   sudo usermod -aG docker one
-
-   # Switch to user 'one'
-   sudo -iu one
-
-   # Install zsh + Oh My Zsh
-   chsh -s /usr/bin/zsh
-   export RUNZSH=no
-   export CHSH=no
-   sh -c "$(curl -fsSL https://raw.githubusercontent.com/ohmyzsh/ohmyzsh/master/tools/install.sh)"
-
-   # Set theme
-   sed -i 's/^ZSH_THEME=.*/ZSH_THEME="tjkirch"/' ~/.zshrc
-
-   # Install Oh My Zsh plugins
-   git clone https://github.com/zsh-users/zsh-autosuggestions
- ${ZSH_CUSTOM:-~/.oh-my-zsh/custom}/plugins/zsh-autosuggestions
-   git clone https://github.com/zsh-users/zsh-syntax-highlighting
- ${ZSH_CUSTOM:-~/.oh-my-zsh/custom}/plugins/zsh-syntax-highlighting
-
-   # Enable plugins
-   sed -i 's/^plugins=.*/plugins=(git zsh-autosuggestions zsh-syntax-highlighting)/' ~/.zshrc
-
-   # Add aliases and history config
-   cat >> ~/.zshrc <<'EOF'
-
-   # Custom aliases
-   alias lh='ls -lh'
-   alias lah='ls -lah'
-
-   # History settings
-   HISTFILE=~/.zsh_history
-   HISTSIZE=100000
-   SAVEHIST=100000
-   setopt APPEND_HISTORY
-   setopt INC_APPEND_HISTORY
-   setopt SHARE_HISTORY
-   setopt EXTENDED_HISTORY
-   setopt HIST_IGNORE_DUPS
-   setopt HIST_IGNORE_ALL_DUPS
-   setopt HIST_EXPIRE_DUPS_FIRST
-   setopt HIST_IGNORE_SPACE
-   setopt HIST_REDUCE_BLANKS
-   EOF
-
-   # Install fzf
-   git clone --depth 1 https://github.com/junegunn/fzf.git ~/.fzf
-   ~/.fzf/install --all
-
-   # Reload shell
-   source ~/.zshrc
-
-   # Prepare dcm4chee directories
-   sudo mkdir -p /var/local/dcm4chee-arc/{ldap,slapd.d,db,wildfly,storage}
-   sudo chown -R one:one /var/local/dcm4chee-arc
-
-   # Ensure timezone file exists
-   cat /etc/timezone || echo "Asia/Jakarta" | sudo tee /etc/timezone
-
-   # Create working dir
-   mkdir -p ~/dcm4chee
-   cd ~/dcm4chee
-
-   # Record setup session
-   script -aq ~/setup-dcm4chee-$(date +%F-%H%M%S).log
-
-   # Create docker-compose.yml
-   cat > docker-compose.yml <<'EOF'
-   version: "3"
-   services:
-     ldap:
-       image: dcm4che/slapd-dcm4chee:2.6.10-34.2
-       logging:
-         driver: json-file
-         options:
-           max-size: "10m"
-       ports:
-         - "389:389"
-       environment:
-         STORAGE_DIR: /storage/fs1
-       volumes:
-         - /var/local/dcm4chee-arc/ldap:/var/lib/openldap/openldap-data
-         - /var/local/dcm4chee-arc/slapd.d:/etc/openldap/slapd.d
-     db:
-       image: dcm4che/postgres-dcm4chee:17.4-34
-       logging:
-         driver: json-file
-         options:
-           max-size: "10m"
-       ports:
-         - "5432:5432"
-       environment:
-         POSTGRES_DB: pacsdb
-         POSTGRES_USER: pacs
-         POSTGRES_PASSWORD: pacs
-       volumes:
-         - /etc/localtime:/etc/localtime:ro
-         - /etc/timezone:/etc/timezone:ro
-         - /var/local/dcm4chee-arc/db:/var/lib/postgresql/data
-     arc:
-       image: dcm4che/dcm4chee-arc-psql:5.34.2
-       logging:
-         driver: json-file
-         options:
-           max-size: "10m"
-       ports:
-         - "8080:8080"
-         - "8443:8443"
-         - "9990:9990"
-         - "9993:9993"
-         - "11112:11112"
-         - "2762:2762"
-         - "2575:2575"
-         - "12575:12575"
-       environment:
-         POSTGRES_DB: pacsdb
-         POSTGRES_USER: pacs
-         POSTGRES_PASSWORD: pacs
-         WILDFLY_CHOWN: /storage
-         WILDFLY_WAIT_FOR: ldap:389 db:5432
-       depends_on:
-         - ldap
-         - db
-       volumes:
-         - /etc/localtime:/etc/localtime:ro
-         - /etc/timezone:/etc/timezone:ro
-         - /var/local/dcm4chee-arc/wildfly:/opt/wildfly/standalone
-         - /var/local/dcm4chee-arc/storage:/storage
-   EOF
-
-   # Start dcm4chee
-   docker-compose -p dcm4chee up -d
-
-   # Verify
-   docker-compose -p dcm4chee ps
-   ss -tulpn | grep -E '389|5432|8080|8443|9990|9993|11112|2762|2575|12575'
-   tail -f /var/local/dcm4chee-arc/wildfly/log/server.log
-
-   # UI
-   # http://<server-ip>:8080/dcm4chee-arc/ui2
-   # https://<server-ip>:8443/dcm4chee-arc/ui2
-
-   # Basic firewall
-   exit
-   sudo ufw allow OpenSSH
-   sudo ufw allow 8080/tcp
-   sudo ufw allow 8443/tcp
-   sudo ufw allow 11112/tcp
-   sudo ufw allow 2575/tcp
-   sudo ufw allow 2762/tcp
-   sudo ufw allow 12575/tcp
-   sudo ufw enable
-   sudo ufw status verbose
-
-   # Enable fail2ban
-   sudo systemctl enable --now fail2ban
-   sudo fail2ban-client status
- ```
-
-## PACS Server set up
-in config file, find pacs section
-you can change ae_title: "DCM4CHEE" (default)
-
-## OUR_AE set up
-Create new AET in https://<ip_>:8443/dcm4chee-arc/ui2/en/device
-
-warning: set host to not localhost if you use docker-compose! 
-
-set to machine's private local ip (ex: 10.0.72.92) or public (not recommend)
-
-in config file, find our_ae section
-you can change ae_title: <created_ae>
-
-port: <set_port>
-
-## Make it service
-
-```bash
-   sudo useradd --system --home /opt/dicom-iso --shell /usr/sbin/nologin mkiso
-   sudo chown -R mkiso:mkiso /opt/dicom-iso
-   sudo systemctl restart mkiso-server
-   sudo systemctl status mkiso-server
- ```
-
- If user already exists, just run:
-
- ```bash
-   sudo chown -R mkiso:mkiso /opt/dicom-iso
-   sudo systemctl restart mkiso-server
- ```

pkg/dicom/command.go

@@ -142,7 +142,7 @@ func RunFindSCUStudyUIDs(ctx context.Context, bin, ourAE, pacsAE, pacsHost strin
 	uidRe := regexp.MustCompile(`\(0020,000d\) UI \[([^\]]+)\]`)
 	seen := make(map[string]bool)
 	for _, match := range uidRe.FindAllStringSubmatch(combined, -1) {
-		uid := strings.Trim(match[1], " \t\r\n\x00")
+		uid := strings.TrimSpace(match[1])
 		if uid == "" || seen[uid] {
 			continue
 		}

scripts/setup-dcmtk.sh

@@ -95,12 +95,12 @@ trap cleanup EXIT
 
 if [[ -n "$ARCHIVE_URL" ]]; then
   TMP_DIR="$(mktemp -d)"
-  archive_name="$(basename "${ARCHIVE_URL%%\?*}")"
+  archive="$TMP_DIR/archive"
-  [[ -n "$archive_name" && "$archive_name" != "/" ]] || archive_name="archive.tar.gz"
-  archive="$TMP_DIR/$archive_name"
   download "$ARCHIVE_URL" "$archive"
   mkdir -p "$TMP_DIR/extracted"
-  extract_archive "$archive" "$TMP_DIR/extracted"
+  mv "$archive" "$TMP_DIR/archive$(basename "$ARCHIVE_URL" | sed 's/.*\(\.[^.][^.]*\)$/\1/')" 2>/dev/null || true
+  archive_path="$(find "$TMP_DIR" -maxdepth 1 -type f | head -n 1)"
+  extract_archive "$archive_path" "$TMP_DIR/extracted"
   SOURCE_DIR="$TMP_DIR/extracted"
 fi
 

scripts/setup-microdicom.sh

@@ -91,9 +91,7 @@ trap cleanup EXIT
 
 if [[ -n "$ARCHIVE_URL" ]]; then
   TMP_DIR="$(mktemp -d)"
-  archive_name="$(basename "${ARCHIVE_URL%%\?*}")"
+  archive="$TMP_DIR/$(basename "$ARCHIVE_URL")"
-  [[ -n "$archive_name" && "$archive_name" != "/" ]] || archive_name="microdicom.zip"
-  archive="$TMP_DIR/$archive_name"
   download "$ARCHIVE_URL" "$archive"
   mkdir -p "$TMP_DIR/extracted"
   extract_archive "$archive" "$TMP_DIR/extracted"